Nikon TE2000-E inverted microscope
Bombardier Building, Room 3132 Instrument awarded to Dr Steve Michnick by the Canadian Foundation for Innovation (CFI) Advanced Microscope Tier 1 usage price
Applications - Transmitted light, Bright-field, Phase Contrast
Fluorescence - Live imaging
- Time-lapse imaging
Light sources
Objectives - 4x/0.1 Air
- 10x/0.30 Air Ph1
- 20x/0.45 Air Ph1
- 40x/0.95 Air
- 60x/1.4 Oil Ph3
- 100x/1.45 Oil
Position | Name | Brand | Full name | Identifier | Working distance (mm) | Transmittance (% [nm]) | Techniques | Cover glass thickness (mm) |
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1 | 4x/0.10 Air | Nikon | 4x/0.1 Plan | MRL00042 | 30 | >80% [400-900] | BF, Fluo | - | 2 | 10x/0.30 Air Ph1 | Nikon | 10x/0.30 Plan Fluor Ph1 DL | MRH20101 MRH20105 | 15.2 | >80% [440-700] | BF, PhC, Fluo | 1.2 ! | 3 | 20x/0.45 Air Ph1 | Nikon | 20x/0.45 Plan Fluor ELWD Ph1 ADL | MRH48230 MRH48220
| 7.4 | >80% [350-870] | BF, PhC, Fluo | 0-2 | 4 | 40x/0.95 Air | Nikon | 40x/0.95 Plan Apo DIC M/N2 | MRD00400 MRD70470 | 0.14 | >80% [440-760] | BF, Fluo | 0.11-0.23 | 5 | 60x/1.4 Oil Ph3 | Nikon | 60x/1.4 Plan Apo Ph3 DM | MRD31600 | 0.21 | | BF, PhC, Fluo | 0.17 | 6 | 100x/1.45 Oil | Nikon | 100x/1.45 Plan Apo Lambda OFN25 DIC N2 | MRD01905 MRD71970
| 0.13 | >80% [460-720] | BF, Fluo | 0.17 |
Also available Position | Name | Brand | Full name | Identifier | Working distance (mm) | Transmittance (% [nm]) | Techniques | Cover glass thickness (mm) |
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- | 40x/0.60 Air Ph2 | Nikon | Plan Fluor 40x/0.60 Ph2 DIC M ELWD 0-2 | MRH48430 | 2.7-3.7 | >80% [350-850] | BF, PhC, Fluo | 0-2 | - | 40x/0.60 Air | Nikon | S Plan Fluor 40x/0.6 ELWD DIC N1 | MRH08430 | 2.8-3.6 | >80% [350-850] | BF, Fluo | 0-2 | - | 40x/0.90 Air | Nikon | S Fluor 40x/0.90 DIC M/N2 | NA
| 0.3 | NA
| BF, Fluo | 0.11-0.23 | - | 60x/0.70 Air | Nikon | Plan Fluor 60x/0.70 ELWD DIC M/N1 | MRH08630 | 1.5-2.1 | >80% [380-880] | BF, Fluo | 0.5-1.5 | - | 60xA/1.40 Oil | Nikon | Plan Apo 60xA/1.40 Oil DIC H | MRD71670 | 0.21 | >80% [480-700] | BF, Fluo | 0.17 | - | 60x/1.4 Oil | Nikon | Plan Apo VC 60x/1.40 Oil DIC N2 | MRD71670 | 0.13 | >80% [480-700] | BF, Fluo | 0.17 | - | 100x/0.85 Air | Nikon | L Plan 100x/0.85 ODN 25 | MUE35900
| 0.85 | |
| 0-0.7 | - | 100x/1.4 Oil | Nikon | Plan Apo 100x/1.4 Oil DIC H | MRD71970 | 0.13 | >80% [480-720] | BF, Fluo | 0.17 |
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Filters Dichroic DAPI\FITC\TRITC Dichroic CFP\YFP\Cy5 Dichroic CFP\YFP\mCherry - DAPI
- Cy3n
- Cy5.5
- Also available
CFP FITC YFP Cy3.5 mCherry Cy5
Filter cubes
Excitation filters
Emission filters Also available |
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- Turn on the computer (#1)
- Remove the cover from the microscope
- Turn on the X-Cite exacte light (#2)
- Turn on the microscope power bar (#3)
- Use your UdeM credentials to log in to Windows
- The first time you use the instrument, you need to import the microscope settings into the software. To do this follow the instructions First use protocol.
- Start the software NIS
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- Save your data
- If the oil objective was used, clean it with lens cleaner and lens paper (not Kimwipes)
- Select the lowest magnification objective
- Close the software NIS
- Transfer your data to the D: drive (Data Storage) or to your external drive and delete it from the local C: drive
- Turn off the computer
- Turn off the X-Cite exacte light (#2)
- Turn off the microscope power bar (#3)
- Cover the microscope
- Collect your samples, especially those in the microscope
- Leave the microscope and workspace clean
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- Files can be saved temporarily (during acquisition) to local C: drive (desktop)
- At the end of each session, copy your data to your external drive and delete it from local C: drive
- You can store your files on the D: drive (Data Storage). If you do, please create one folder per laboratory using the principal investigator's last name. Inside, create a folder per user using the following nomenclature (First Name_Last Name).
In any case, do not store your files on the C: drive. |
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When using the microscope for the first time, you need to import the microscope settings into the software. You will usually do this during the training session. This procedure can also be performed if something is not working properly and if you want to reset the software to its original settings.
This process will delete all experiment protocols and reset the software to the original settings for this specific microscope. |
- If open, close the software NIS and wait until it is completely closed (up to 30 seconds)
- On your Desktop open the Softwares folder
- Open NIS Settings Utility
- Click on the Import tab
- Click on Browse
- Navigate to your Documents
- Select the file NIS Settings for Nikon TE2000E.bin
- Click Select
- Select all items
- Click Import
- Click OK
- Close NIS Settings Utility
- You can now reopen NIS
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- Complete installation
- Complete cleaning
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Stand- Nikon TE2000-E inverted
- Nikon T-HUBC Serial 750110
- Nikon PFS T-PFS 810060
- Nikon T-RCP Serial 750104
Light sources- Transmitted Halogen light Nikon TE2-PS100W Serial 505320 12V
- GIF Filter
- Diffusion
- Infra-red
- Neutral color
- Transmitted light shutter uniblitz VCM D1 Serial A607295
- X-Cite exacte Model XCT10A 200 W Seria;l XCT10A-0337
- EXFO Collimator 810-00030
- Prior Shutter HF201HT Serial 7332
- Prior 8 position motorized excitation filter wheel 61817
- Nikon Manual Neutral density filters ND8 ND4
- Manual Fluorescence field diaphragm
- Manual Fluorescence shutter
CondenserObjectivesStage- Prior Proscan 2 H30V4 Serial 62040
- Remote control joystick Prior CS152v2 Serial R0772128
- Inserts
- 1 slide
- Multi-well plate
- Adapter for 3cm dish
Filters Detector- Hamamtsu ORCA Flash V2 CMOS Model C11440-22CU Serial 002162 V2
- Monochrome Camera 2048 x 2048 pixels
- Pixel 6.5 um x 6.5 um
- Force air cooled at -10C
- Effective sensor area 13.312 mm (H) × 13.312 mm (V
- Dark curent 0.06 electron/pixel/s
- Reading noise 1.6 electrons (r.m.s) at standard scan
- Dynamic range 1 : 18 000
- Spectral response >40% between 400-850nm. Max 80% at 550nm
 - Hamamatsu_Orca Flash 4.0_V2_C11440-22CU_Instruction Manual.pdf
Workstation- HP Z800 Workstation
- 2 x Intel Xeon X5650 @ 2.67GHz
- RAM 24 GB DDR3 666 MHz (6 x 4 GB)
- OS 500 GB SSD 530 MB/s
- 3 TB HD Data Storage (2 TB + 1 TB spanned volume) 130 MB/s
- Video Card AMD FirePro V5800 1 GB dedicated memory
- Monitor Dell 2407EFP-HC 1900x1200 60Hz
- Software NIS-Elements AR v4.20.02 Build 988 HASP ID 4683DFE6
- Core NIS-AR 2.3x STANDARD SUA Activation date 2010-07-07 SUA paid 2x SUA Expiration date 2013-08-07
- Modules SRM ,Filter Wheel, ND (6 dimensions), Shutter, Stage XY axis
Consumables- Liquid Light Guide
- excite exacte bulb
- 12V halogen bulb
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Troubleshooting
This can happen when the acquisition software is turned on before the camera has fully initialized. - Turn off NIS-Elements
- Ensure the Initialize light at the back of the camera no longer blinks
- Start NIS-Elements
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FAQ- Yes. This is an inverted microscope designed to look at specimen in a dish or a multi-well plate
- The objectives are optimized to image through thin glass bottom multi-well plates
- You may also image specimen mounted between a slide and a 0.17mm thick coverslip
- For long timelapse, be aware of photo-toxicity
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