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Visualization, Processing and Analysis softwares

ImageJ ImageJ (nih.govNIH)

FIJI ImageJ Wiki

Imaris Oxford Instruments Microscopy Image Analysis Software - Imaris - Oxford Instruments (oxinst.com)

ImagePro Image-Pro (mediacy.com)

AutoQuant Best Image Deconvolution and Restoration Software - Autoquant X3 (mediacy.com)

FIJI (Fiji Is Just ImageJ)

Spot Imaging
Used to control Spot cameras with some analysis capabilities. Software ranges from 500$ to 1000$

Imaris Oxford Instruments
Dedicated to multidimensional visualisation and analysis. Requires a License.

Image-Pro (MediaCybernetics)
To be tested.
Seems to be also sold by Asia Imaging

AutoQuant (MediacCybernetics)
Used for deconvolution. Fast, Simple and Accurate. Requires a license.
Seems to be also sold by Asia Imaging

Amira (Thermo Fisher Scientific)
To be testedAmira Amira for Life & Biomedical Sciences | Thermo Fisher Scientific - CA

ICY Home - Icy – Open Source Image Processing Software (bioimageanalysis.org)

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