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Commentaire: Incubation chamber maintenance

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Button Hyperlink
iconbuild
titleFrançais
typeprimary
urlhttps://wiki.umontreal.ca/display/Microscopie/Nikon+Ti2-E


20x75 DIC N2
Tabs Container
idInstrument Tabs
titleNikon Eclipse E600Ti2-E
directionhorizontal


>75% 400800 DIC
Tabs Page
idDescription
titleDescription


Nikon Ti2-E

fully motorized

inverted microscope

Roger Gaudry Building, Room R-619
Instrument awarded to Dr Paradis-Bleau the Canadian Foundation for Innovation (CFI)
Advanced Microscope Tier 1 usage price

  • Applications

    • Transmitted light, Bright-field
    • Phase contrast
    • Polarized light, DIC

    • Fluorescence

    • Live imaging
    • Time-lapse imaging

    Applications

    • Brightfield

    • Phase Contrast

    • Polarized light

    • Fluorescence
  • Light sources

    • LED lamp for transmitted light

    • Lumencor SpectraX laser fluorescence for fluorescence

Développer
titleLumencor SpectraX complete specifications


name

470/24-25

SourceIDFilter typeExcitation FilterTypeWorking distance (mm)Transmittance
(% [nm])
R

640/30-25

Plan Fluor2.1>75% [400-800]
GExcitation FilterDichroic mirrorEmission Filter
B

440/20-25

350/50x [325-375]400LP460/50m [435-485]
NT

510/25-25

Plan Apo Lambda0.13V

395/25-25

GY550\15-25Plan Apo Lambda

TBD

Storage

GY

575\25-25
wavelengths (nm)Compatible fluorophoresNominal power (mW)
Violet

395/25

Bandpass[382-407]

DAPI, Hoechst

295
Blue

440/20

Bandpass[430-450]CFP256
Cyan

470/24

Bandpass[458-482]FITC, GFP196
Teal

510/25

Bandpass[497-522]YFP62
Green/Yellow550/15Bandpass

[542-557]

TRITC, Cy3

260

Green/Yellow (Storage)

575/25Bandpass[562-587]

mCherry

310
Red

640/30

Bandpass[625-655]

Cy5

231



  • Objectives

    1. 20x/0.5 Air Ph1 WD 2.1

    Objectives

    20x/0.5 Air Ph1
    1. 60x/1.4 Oil DIC WD 0.13
    2. 100x/1.45 Oil Ph3 WD 0.13
    3. 100x/1.45 Oil DIC WD 0.13
    Empty
    1. 4x/0.2 Air WD 20
    2. 20x
    \
    1. /0.75 Air
    DIC 
    1. DIC WD 1.0
400750
Développer
titleObjectives complete specifications


Technique WD 2.1 ? Air>75% 800
PositionNameBrandIDMagnificationNumerical ApertureImmersionTypeFull nameIdentifierWorking distance (mm)Transmittance
(% [nm])
TechniquesCover glass thickness (mm)
120x/0.5 Air Ph1Nikon

20x/0.5 Air Plan Fluor

Ph1

20x0.5AirPlan FluorMRH102012.1>80% [400-750]BF, Pol, PhC, Fluo0.17
2

60x/1.4 Oil DIC

Nikon60x/1.4 Oil Plan Apo Lambda DIC N260x

1.4

Remarque
Oil
MRD01605Plan Apo Lambda0.13>80% [475-725]BF, Pol, DIC, Fluo0.17
3

100x/1.45 Oil Ph3

Nikon100x/1.45 Oil Plan Apo Lambda Ph3

100x

1.45
Remarque
Oil
PPlan Apo Lambda
MRD319050.13>80% [475-750]BF, Pol, PhC, Fluo0.17
4100x/1.45 Oil DICNikon100x/1.45 Oil Plan Apo Lambda DIC N2

100x

1.45

Remarque
Oil
MRD01905Plan Apo Lambda0.13>80% [475-750]BF, Pol, DIC, Fluo0.17
5Empty620x4x/0.75 2 Air DICNikon4x/0.2 Air Plan Apo Lambda20x

MRD00045

20>80% [400-1000]BF, Fluo0.17
620x/0.75 Air DICNikon20x/0.75 Air Plan Apo Lambda DIC N2MRD00205

1.0

>80% [400-950]0.75AirPlan Apo LambdaTBDBF, Pol, DIC, Fluo0.17


  • FiltersFilter cubes

    1. DAPI

    /Hoechst/AMCA
  • FITC/EGFP

  • TRITC/Rhodamine

  • TexasRed
    1. GFP/FITC (CFP)

    2. Cy5

    3. DAPI/GFP/Cy3/Cy5 (requires Cy3 filter in Lumencor SpectraX Green/Yellow position)

    4. DIC Analyzer
    5. CFP/YFP/mCherry (requires mCherry filter in Lumencor SpectraX Green/Yellow position)

400LP
Développer
titleFilters complete specifications


Position
Cube name
NameBrandIDExcitation FilterDichroic mirrorEmission FilterComments
1DAPI
/Hoechst/AMCA
ChromaCube set 31000v2350/50x [325-375]
NikonDAPI-U HQ395/25x
[383-408]
425LP460/50m
 

[435-485]
C-FL-C DAPI-U HQ
2
FITC/EGFP
GFP
ChromaCube set 41001

480/40x [420-500]

505LP

535/50m [510-560]3TRITC/RhodamineChroma

Cube set 41002c

545/30x [530-560]570LP620/60m [590-650]4Texas RedChroma

Cube set 41004

560/55x [532-588]

595LP645/75m [607-682]5Empty6Empty
  • Detector

    • Color CMOS Nikon DS-Ri2 4908 x 3264 pixels,14-bit, 6fps at full frame

SemrockGFP-4050B-000

466/40x
[446-486]

495LP

525/50m

[500-550]
Nikon ID 96372
3Cy5Semrock

Cy5-5070A

617/55x
[590-645]
652LP697/77m
[659-736]
Nikon ID 96376
4

DAPI/GFP/Cy3/Cy5

Semrock

C182279

None

409/493/573/652432/515/595/68177074160 Custom Quad C182279.
Excitation filters are in the Lumencor SpectraX light source
5

DIC Analyzer

NikonTi2-C-DICACLNot ApplicableNot ApplicableNot ApplicableUsed for DIC imaging
6

CFP\YFP\mCherry

SemrockC1997767None459/526/596

475/543/702

Excitation filters are in the Lumencor SpectraX light source



  • Detector

    • Hamamatsu ORCA Flash V2 C11440-22CU CMOS Monochrome Camera 2048 x 2048 pixels, 16-bit, 30 images/s at full frame


  1. Save your data
  2. Close NIS-Elements
  3. Transfer your data to the D: drive (Data Storage) or to your external drive and delete it from the local C: drive
  4. Get your samples from the microscope
  5. If used, clean the oil objective with lens cleaner and lens paper
  6. If fluorescence was used, turn off the mercury lamp power supply unit (3A)
  7. Turn off the microscope power bar (2)
  8. Wait until the lamps are cool and cover the microscope
Tabs Page
idUser Guide
titleUser Guide


UI Expand
expandedtrue
titleStartup
  1. Turn on the computer (#1)
  2. Remove the cover from the microscope
  3. Turn on the microscope power bar (#2)
  4. If incubation is required, turn on the Okolab incubation module (#3A), the Lauda water bath (#3B) and open the CO2 (#3C) and N2 (#3D) tanks

    Avertissement

    Make sure the humidifier and the water bath are clean and properly filled with distilled water.


  5. Use your UdeM credentials to log in to Windows
  6. Start the software NIS-Elements
Info

The first time you use the instrument, you need to import the microscope settings into the software. To do this follow the instructions First use protocol.



UI Expand
titleShutdown
  1. Save your data
  2. Close NIS-Elements software
  3. Transfer your data to the D: drive (Data Storage) or
Tabs Page
idUser Guide
titleUser Guide
  • Turn on the computer
  • Turn on the microscope power bar
  • If fluorescence is required, turn on the mercury lamp power supply unit (3A) and press ignition (3B)

    UI Expand
    expandedtrue
    titleStartup
    Avertissement

    Mercury lamp must be on for at least 30 min before being turned off and vice-versa

  • Log in Windows using your UdM credentials
  • Start-up NIS-Elements
  • Info

    The first time you log in the computer, you need to import the microscope settings. To do this follow the instructions Setting-up NIS-Elements

    UI Expand
    titleShutdown
    Remarque
    titleImportant Reminders
    • Take back your samples including ones in the microscope
    • Leave the microscope and the working area clean
    • Mercury lamp must be on for at least 30 min before being turned off and vice-versa
    UI Expand
    titleStorage Management
  • Files can be saved temporarily (during acquisition) on the local C: drive (desktop)
  • At the end of each session, copy your data
    1. to your external drive and delete it from the local C: drive
  • You can store your files on the D: drive (Data Storage). If you do, please create a folder per laboratory using the principal investigator last name. Within, create one folder per user (Firstname_Lastname).
  • Remarque

    In any case, your files should be removed from the C: drive.

    UI Expand
    titleSetting-up NIS-Elements
    AncreSetting-up NIS-ElementsSetting-up NIS-Elements

    This process is required the first time you are using the instrument. You will usually do it during the training session. It can also be performed if something is not working properly right or if you want to refresh the software interface.

    Remarque

    This process will delete all experiment protocols and restore the parameters for the microscope.

    1. Close NIS-Elements
    2. Wait until the complete closure of NIS-Elements
    3. Open the folder Desktop\Logiciels
    4. Open the software NIS Settings Utility
    5. Click on the Import tab
    6. Click on Browse
    7. Navigate to your desktop
    8. Select the file Nikon-E600 Settings.bin
    9. Click Select
    10. Select all items
    11. Click Import
    12. Click OK
    13. Close the NIS Settings
    14. Open NIS-Elements
    Tabs Page
    idLightpath
    titleLight path

    Light path

    Download the schematics to follow Transmitted light (Bright field, Phase Contrast, Polarized light) and Reflected light (fluorescence) paths.

    Light path schematics.pdf

    Tabs Page
    idManuals
    titleManuals

    Manuals

    Tabs Page
    idLog
    titleLog
    UI Expand
    expandedtrue
    titleTo do
    • Adjust focus drive jitter
    • Add a holder for polarized light analyzer
    UI Expand
    title2018-04-04
    • Nikon Preventive Maintenance
    • Adjustment and cleaning Stage Nosepiece, condenser, filter turret, focus drive, shutters
    • 100x slightly damaged but not the lens
    • Fluorescence cubes damaged: FITC TexasRed
    • Focus drive has a jitter
    UI Expand
    title2021-07-20
    • Replacement mercury lamp bulb HBO 1003W/2
    • 256 GB SSD added in workstation for OS
    • Windows 10 Installation
    • BIOS updated to v2.47
    • Camera Firmware updated to v2.11
    • NIS-Elements Basic Research v4.6 64-bits installed
    • Creation NIS Elements Settings
    • FITC and TxRed cubes excitation and emission filters slightly damaged. Dichroic OK
    Tabs Page
    idTechnical Datasheet
    titleTechnical Datasheet

    Stand

    • Nikon Eclipse E600 upright Serial 725540

    Light sources

    • Transmitted light Halogen 12V 100W Serial 01875599
    • Reflected light
      • Power supply Nikon Mercury lamp Type C SHG1 Serial D12139
      • Bulb housing model LH M100C-1 Serial 039326

    Condenser

    • Condenser Universal C-CU Serial 081901
    • Lens Dry NA 0.9
    • Filters: Empty, Ph1, Ph2, Ph3, DICM, DICH, Empty

    Objectives

    • 10x/0.3 Plan Fluor Ph1 DLL WD 16 Air
    • 40x/0.75 Plan Fluor Ph2 DLL WD 0.72 Air with PF40 Wollaston prism
    • 100x/1.3 Plan Fluor Ph3 DLL WD 0.2 Oil with PF/PA 100 Oil Wollaston prism
    • Empty
    • Empty
    • Empty
    Développer
    titleObjectives complete specifications
    PositionNameBrandIDMagnificationNumerical ApertureImmersionTypeWorking distance (mm)Transmittance
    (% [nm])TechniqueCover glass thickness (mm)110x/0.3 AirNikon10x/0.3 Air Plan Fluor Ph1 DLL10x0.3AirPlan Fluor16>75% [400-800]BF, Pol, PhC, Fluo0.172

    40x/0.75 Air

    Nikon40x/0.75 Air Plan Fluor Ph2 DLL40x

    0.75

    Air

    Plan Fluor0.72>80% [400-750]BF, Pol, PhC, Fluo0.173

    100x/1.3 Oil

    Nikon100x/1.3 Oil Plan Fluor Ph3 DLL

    100x

    1.3
    Remarque
    Oil
    Plan Fluor0.2>75% [400-800]BF, Pol, PhC, Fluo0.174Empty5Empty6Empty

    Filters

    • DAPI/Hoechst/AMCA

    • FITC/EGFP

    • TRITC/Rhodamine

    • TexasRed

    Développer
    titleFilters complete specifications
    PositionCube nameBrandIDExcitation FilterDichroic mirrorEmission Filter1DAPI/Hoechst/AMCAChromaCube set 31000v2350/50x [325-375]400LP460/50m [435-485]2FITC/EGFPChromaCube set 41001

    480/40x [420-500]

    505LP

    535/50m [510-560]3TRITC/RhodamineChroma

    Cube set 41002c

    545/30x [530-560]570LP620/60m [590-650]4Texas RedChroma

    Cube set 41004

    560/55x [532-588]

    595LP645/75m [607-682]5Empty6Empty

    Detector

    • Color Camera Nikon DS-Ri2 Serial 701234

    Workstation

    • HP Z440 Workstation
    • Intel Xeon E5-1630 v3 @ 3.7GHz
    • RAM 32 GB DDR4 2133 MHz  (4 x 8 GB)
    • OS 256GB SSD 550 MBs
    • 2TB HD Data Storage 150 MBs
    • Video Card NVIDIA Quadro K620 2 GB DDR3 dedicated memory
    • Monitor HP Z24i display 24' 1920x1200

    Consumables

    Tabs Page
    idFAQ
    titleTroubleshooting & FAQ
    UI Expand
    expandedtrue
    titleTroubleshooting

    NIS-Elements shows an error: Camera Driver...

    This happens when NIS-Elements does not find the camera. It is usually because the camera is not powered on.

    • Turn off NIS-Elements
    • Turn on the camera (the microscope power bar and the camera switch on the top of the camera)
    • Check the USB conexion between the camera and the computer
    • Turn on NIS-Elements
    UI Expand
    titleFAQ

    Can I use this microscope to look at cell in a dish?

    • No. This is an upright microscope designed to look at specimen between a glass slide and a 0.17mm thick cover slip.
    Tabs Container
    idDemo Image
    directionhorizontal
    Tabs Page
    idDemo Images
    titleDemo Images
    Image Removed
    1. Turn off the computer
    2. If oil objectives were used, clean it with lens cleaner and lens paper (not Kimwipes)
    3. If incubation was used, turn off the Okolab incubation module (#3A),Lauda water bath (#3B) and close the CO2 (#3C) and N2 (#3D) tanks
    4. Wait until the SpectaX has cooled down and turn off the microscope power bar (#2)
    5. Cover the microscope
    Remarque
    titleImportant Reminders
    • Collect your samples, especially those in the microscope
    • Leave the microscope and workspace clean



    UI Expand
    titleStorage management
    • Files can be saved temporarily (during acquisition) to local C: drive (desktop)
    • At the end of each session, copy your data to your external drive and delete it from local C: drive
    • You can store your files on the D: drive (Data Storage). If you do, please create one folder per laboratory using the principal investigator's last name. Inside, create a folder per user using the following nomenclature (First Name_Last Name).
    Remarque
    titleImportant

    In any case, do not store your files on the C: drive.




    UI Expand
    titleFirst use

    Ancre
    FirstUse
    FirstUse
    When using the microscope for the first time, you need to import the microscope settings into the software. You will usually do this during the training session.
    This procedure can also be performed if something is not working properly and if you want to reset the software to its original settings.

    Remarque

    This process will delete all experiment protocols and reset the software to the original settings for this specific microscope.

    1. If open, close NIS-Elements and wait until it is completely closed (up to 30 seconds)
    2. On your Desktop open the Softwares folder
    3. Open NIS Settings Utility
    4. Click on the Import tab
    5. Click on Browse
    6. Navigate to your Desktop
    7. Select the file Nikon-Ti2 Settings.bin
    8. Click Select
    9. Select all items
    10. Click Import
    11. Click OK
    12. Close the NIS Settings
    13. You can now reopen NIS-Elements



    Tabs Page
    idLight path
    titleLight path


    The following schematics depict the light path for transmitted (bright-field and Phase Contrast) and reflected (fluorescence) lights.


    PDF
    nameLightPath_Nikon Ti2.pdf


    Tabs Page
    idManuals
    titleManuals


    Available manuals


    Tabs Page
    idLog
    titleLog


    UI Expand
    expandedtrue
    titleTo do
    • Check condenser filters if labels match
    • Check why 20x/0.75 DIC objective has no DIC prism
    • Condenser DIC prism is DIC N1 while objective requires N2
    • Check why at 4x Condenser gives a black shadow on the righ side of the image
    • Adjust Objective XYZ offset
    • Check plane because FOV is not flat
    UI Expand
    title2024-03-20 Incubation maintenance
    • Fixed incubator tubing misplaced
    • Added better attachment for tubing on the incubation chamber
    • Checked incubation chamber for obstruction
    UI Expand
    expandedtrue
    title2023-11-29
    • Fixed condenser holder loose
    • 20x/0.5 Ph1 dirty or damaged likely dirty with varnished


    UI Expand
    title2022-09-22
    • Added network cable between Acquisition and Processing workstations
    • Added shortcuts in Desktop\Documentation


    UI Expand
    title2022-03-16
    • Clean 60x objective (nail polish on it !)
    • Fix damaged stage insert
    • Stage insert tilt adjustment
    • Objective XY offset adjustments


    UI Expand
    title2022-03-16
    • Installed new objective 4x/0.2 Plan Apo Lambda
    • Updated configuration file


    UI Expand
    title2022-02-21
    • Computer maintenance
    • Imaging test slides
    • Re-install DCAM API drivers v22.2.6391
    • Okolab incubation complete maintenance
      • Disassemble Okolab stage insert
      • Disconnect the pipes
      • Disconnect the Lauda water-bath
      • Clean everything with 10% acetic acid (excepted the plastic pipes and washers)
      • Rinse with regular tap water 2 times
      • Rinse with distilled water once
      • Dry, reassemble and reconnect
      • Refill with the Lauda water-bath with 3L of milliQ water
      • Set the Okolab temperature Control Mode to Chamber
      • Set the Okolab temperature to 65°C
      • Let run for 1h. This will sterilize the water.
      • Check for any leakage
      • Set the Okolab temperature Control Mode back to Sample
      • Set the Okolab temperature back to 37°C


    UI Expand
    title2021-12-16
    • Cleaning objectives
    • Control for incubation chamber liquid intrusion


    UI Expand
    title2021-11-30
    • CO2 Calibration for Okolab: Offset of 1%


    UI Expand
    title2021-11-05


    UI Expand
    title2021-09-16
    • 20x/0.75 DIC objective was dirty and has been cleaned
    • Printed and displayed a Memo about available air and oil objectives
    • Adjustment of camera angle
    • Objective calibration
    • Objective XY offset
    • Updated NIS settings
    • Added light path schematics to wikipedia


    UI Expand
    title2021-09-15
    • Okolab display a NAN message for the free thermal sensor
    • The probe is made of two wires that need to be in contact to measure the temperature properly

      • Turn off the Okolab module
      • Disconnect the free sensor probe
      • Cut out the damaged part
      • Carefully expose the two wires
      • Connect the two wires together


    UI Expand
    title2021-09-13
    • Added label on gas bottles
    • Added line mark on humidifier


    UI Expand
    title2021-07-20
    • 512 GB SSD installed for OS
    • Windows 10 Installation
    • BIOS updated to v2.47



    Tabs Page
    idTechnical Datasheet
    titleTechnical Datasheet

    Stand

    • Nikon Ti2-E inverted  Serial 540156 System 170110-Sys-006287

    Light sources

    • Transmitted LED light
      • ND32 filter
      • IR filter
      • Manual Polarizer
    • Lumencor SpectraX 6-NII-SE Serial 9409

    Condenser

    • Motorized condenser Ti2-C-TC-E Serial 519097
    • Lens LWD NA 0.52

    • Filter turret 7 motorized positions

      1. Empty

      2. Empty
      3. Ph1

      4. Ph3

      5. Shutter

      6. Empty

      7. DIC N1

    Objectives

    • 20x/0.5 Air Ph1 WD 2.1
    • 60x/1.4 Oil DIC WD 0.13
    • 100x/1.45 Oil Ph3 WD 0.13
    • 100x/1.45 Oil DIC WD 0.13
    • 4x/0.2 Air WD 20
    • 20x/0.75 Air DIC WD 1.0

    Stage

    • Motorized stage Ti2 SHU compatible Serial 127808
    • Remote control joystick Ti2-S-JS Serial 127976
    • Inserts
      • Multi-well plate Ti2-S-HW with tilt adjustment (no incubation)
      • Combo slide 3cm dish  Ti2-S-HU with tilt adjustment (no incubation)
      • Okolab H101-CellASIC Frame with perfusion ports
        • 1 x 35mm petri dish 1x35-M + cover
        • 2 Chamber Slide 2xGS-M+ cover
        • 1 Multi-well for oil objectives MW-OIL
        • 6-well plate 6MW+ cover
        • 1 CellASIC + cover

    Filters

    1. DAPI Cube Ex 383-408 DAPI-U DM 425 BA 435-485
    2. GFP Cube Semrock 96372 M349727 17
    3. Cy5 Cube Semrock 96376 M351081 8
    4. 77074160 Custom Quad C182279 Polychroic and quad bandpass emitter for use with the following single bandpass filters: ET395/25x, ET470/24x, ET550/15x, ET640/30x
    5. DIC Analyser Ti2-C-DICACL
    6. C197767 7707\4656 CFP\YFP\mCherry XT

    Detector

    • Hamamatsu ORCA Flash V2 C11440-22CU CMOS Monochrome Camera 2048 x 2048 pixels, 16-bit, 30fps at full resolution Serial 101081

    Workstation

    • HP Z440 Workstation
    • Intel Xeon E5-1620 v4 @ 3.5GHz
    • RAM 32 GB DDR4 2400 MHz ECC (4 x 8 GB)
    • OS 500 GB SSD 530 MB/s
    • 4 TB HD Data Storage (2 x 2 TB spanned volume) 130 MB/s
    • Video Card nVidia GTX 1080 8GB DDR5 dedicated memory
    • Monitor HP Z24i display 24' 1920x1200
    • Software NIS-Elements AR v5.02

    Incubation

    • Okolab BoldLine Temperature unit Serial 284-1058 H101 T Unit BL
    • Okolab BoldLine CO2/O2 Unit  0-10/1-18 Serial 088-1102
    • Okolab OkoTouch Serial 118-224
    • Lauda water-bath Model Eco RE415 S LCK 4910 Serial LCK-4910-16-0006 Okolab 1322-1006 2017-05-30

    Consumables

    • CO2 Tank
    • N2 Tank
    • Liquid Light Guide


    Tabs Page
    idFAQ
    titleTroubleshooting & FAQ


    Troubleshooting

    UI Expand
    titleChamber does not reach the desired temperature (or is very slow to warm up)

    This can happen when the liquid running through the chamber is not flowing properly.

    • Pause your experiment
    • Turn off the Okolab environment controller 3A and 3B
    • Disconnect the blue end of the connection pipe (at the junction with the spring shape objective warmer)
    • Place the open end into a dish to collect liquid
    • Turn the Lauda water bath back ON (3B)
    • The liquid should flow quite rapidly, if not proceed as follow
      • Turn OFF the Lauda water bath (3B)
      • Take the 20 mL syringe located inside the drawer labelled Tubing
      • Connect it to the open end of the blue pipe
      • Use the syringe to blow pressurized air into the pipes to clear it out
      • Remove the syringe (and store it back into the Tubing drawer)
      • Test if the liquid is now flowing properly by turning the Lauda water bath back ON (3B)
        • If not repeat the procedure
        • If so, turn OFF the Lauda water-bath (3B)
        • Reconnect the blue and green pipes together
        • Turn the Okolab environment controller 3A and 3B back ON
    Avertissement

    Be careful not to touch your sample when performing these actions as it may displace your current acquisition


    Info
    titleHow the Okolab chamber works
    1. The liquid from the water bath enters the lead first via the red pipe

    2. Then it goes through the lead circuitry to keep it warm
    3. It exists via the unlabeled tube and enters the incubation chamber main body
    4. It goes through the circuitry of the main body and exits via the green labelled tube

    One must maintain a decent amount of liquid in the Lauda water bath to avoid bubble formation in the circuitry

    Because the circuitry inside the top lead and the incubation chamber main body is thin it can get clogged. The procedure above can solve this issue.




    UI Expand
    titleLiquid forming inside the incubation chamber

    This happens when the mixed-gas humidifier is overfilled. Bubbles created by the gas going through the humidifier can bring liquid into the gas feed line.

    • Turn off the Okolab module and the water bath
    • Remove your sample and store it properly
    • Dry the incubation chamber with a clean tissue
    • Carefully remove the cap of the humidifier glass bottle
    Avertissement

    Pay extra care when manipulating the humidifier bottle as it is made of glass and is very fragile

    • Remove distilled water from the humidifier
    Info

    Humidifier shouldn't be more than 2/3rd filled

    • Close the humidifier by replacing the cap
    • Turn on the Okolab module and the water bath



    UI Expand
    titleLiquid forming inside the incubation chamber but the humidifier is not overfilled

    This can happen during long experiments. The high humidity of the gas mixture condensates in the pipe between the humidifier and the incubation chamber.

    • Pause your experiment
    • Disconnect both ends of the yellow tube from the humidifier
    • Drain the tube from any liquid
    • Reconnect the yellow tube to the humidifier
    • You can use a syringe or gas pressure to blow out any liquid from the incubation chamber cover
    Avertissement

    Be careful not to touch your sample when performing this action

    • Wipe any liquid with a tissue
    • Reconnect the yellow tube to the incubation chamber 


    FAQ

    UI Expand
    titleCan I use this microscope to look at cell in a dish?
    • Yes. This is an inverted microscope designed to look at specimen in a dish or a multi-well plate
    • The objectives are optimized to image through thin glass bottom multi-well plates
    • You may also image specimen mounted between a slide and a 0.17mm thick coverslip
    • For long timelapse, be aware of photo-toxicity


    UI Expand
    titleHow can I warm up the incubation chamber faster?

    You may use a trick to warmup the incubation chamber faster. Using this method. you should reach a stable temperature within 30 minutes.

    Avertissement

    Do NOT proceed with your sample but with a blank control (dish with distilled water for example)

    • Place your blank control in the incubation chamber
    • Immerge the tip of the sample temperature probe in the blank
    • Set the Okolab temperature Control Mode to Chamber (Settings>Temperature>Control Mode>Chamber>Save)
    • Set the Okolab temperature to 50°C (Home>Temperature>50°C>Set)
    • Check the temperature of the sample (Menu Magnifier>Sample Temperature). It should take between 10 to 15 minutes for the blank to reach 30°C. 
    Info

    The Lauda water bath is faster to warm up water than to cool it down. Make sure to anticipate and not pass beyond the desired temperature.
    If your desired temperature is 37°C, you can stop the procedure when the blank has reached 30°C.

    When the blank has reach the desired temperature

    • Set the Okolab temperature back to 37°C (Home>Temperature>37°C>Set)
    • Set the Okolab temperature Control Mode to Sample (Settings>Temperature>Control Mode>Sample>Save)
    • Wait 10 to 20 minutes until the temperature stabilizes
    • Then you can safely replace the blank with your sample





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