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titleFrançais
typeprimary
urlhttps://wiki.umontreal.ca/pages/viewpage.action?pageId=193498625

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Tabs Container
idInstrument Tabs
titleZeiss Axio-Imager Z2
directionhorizontal
Tabs Page
idDescription
titleDescription

Zeiss Axio-Observer spinning-disk microscope

J-A Bombardier Building, Room 3223-01
Advanced Microscope Tier 2 usage price

Instrument awarded to Dr. Daniel Zenklusen by the Canadian Foundation for Innovation (CFI)

  • Applications
    • Transmitted light
    • Interference Contrast (DIC)
    • Fluorescence
  • Light sources

    • 12V 100W halogen lamp for transmitted light

    • Lumencor SOLA for visible fluorescence

      Développer
      titleLumencor SOLA complete specifications

      Emission peak (nm)

      Power (mW)

      334

      5

      365

      20

      405

      19

      436

      22

      546

      21

      579

      18


    •  4 lasers 405, 488 561 638

      Développer
      titleLaser complete specifications
      33419436225462157918

      Emission peak Laser line (nm)

      Nominal Power (mW)

      5

      365

      20

      405

      50

      488

      100

      561

      50

      639

      50

  • Objectives

  1. 10x100x/01.30 Air 46 Oil WD 5.300.11

  2. TIRF Divergence adjusting aid

  3. TIRF Angle adjusting aid 
  4. 63x/1.

  5. 40
  6. 46 Oil WD 0.

  7. 19
  8. 1

  9. 100x
  10. 10x/

  11. 1.40 Oil WD
  12. 0.

  13. 17
  14. 3 Air WD 5.2

  15. TIRF adjustment

  16. TIRF adjusment

  17. Empty

    Développer
    titleFull lens specifications

    Position

    Nom

    Marque

    Nom complet

    Identifiant

    Grossissement

    Ouverture numérique

    Immersion

    Type

    Distance de travail (mm)

    Transmittance

    (% [nm])

    Technique

    Épaisseur du couvre-objet (mm)

    1

10x
  1. 100x/

0.30
Air
  1. 1.46 Oil

    Zeiss

10x
  1. 100x/

0
  1. 1.

  1. 46 DIC I

EC
  1. Alpha Plan-

Neo Fluar
  1. ApoChromat

    M27

420340
9901-000
10x
  1. 100x

0
  1. 1.

3
  1. 46

    Remarque
Air
  1. Oil

    Plan

Neofluar
  1. Apochromat

5
  1. 0.

2
  1. 11

>90%
480
780
  1. 800]

    BF, DIC, Fluo

    0.17

    2

Empty
  1. TIRF Divergence adjusting aid

    Zeiss

20x/0.8 DIC II

Plan-Apochromat
W0.8x1/36"

440640-9903-000

20x

0.8

Air

Plan Apochromat

0.55


423682-8801-000









3

TIRF Angle adjusting aid

Zeiss


423682-8802-000









4

63x/1.46 Oil

Zeiss

63x/1.46 DIC III

Alpha Plan-Apochromat
Korr TIRF

M27

420780-9970-000

63x

1.46

Remarque
Huile

Plan Apochromat

0.10

>80% [500

>90% [410
  1. -800]

    BF, DIC, Fluo

    0.15-0.

17

3

Zeiss

19

5

10x/0.3 Air

Zeiss

10x
40x
  1. /0.
75 DIC II

  1. EC Plan-
Neofluar
  1. NeoFluar
M27

420360-9900-000

40x
  1. 0.
75
  1. 3

    Air

    Plan

Neofluar
  1. -NeoFluar

0
  1. 5.
71
410
780
  1. 750]

    BF, DIC, Fluo

    0.17

4

63x/1.40

Huile

Zeiss

63x/1.4 DIC III

Plan-Apochromat

M27

420782-9900-000

63x

1.4

Remarque
Huile

Plan Apochromat

0.19

>80% [440-710]

BF, DIC, Fluo

0.17

5

Empty

6

100x/1.40
Huile

Zeiss

100x/1.4 DIC III
Plan-Apochromat
M27

420792-9900-000

100x

1.4

Remarque
Huile

Plan Apochromat

0.17

>80% [400-820]

BF, DIC, Fluo

0.17

BF: Bright-field
DIC: Interference contrast

  • Filter cubes
  • DAPI
  • BP405
  • 76
  • 77
  • Empty
    Développer
    titleComplete filter specifications

    Position

    Nom

    Marque

    Identifiant

    Filtre d'excitation 

    Miroir dichroïque

    Filtre d'émission

    Commentaire

    1

    DAPI

    Filter Set 49

    Zeiss

    488049-9901-000

    365/50

    [340-390]

    395LP

    445/50

    [420-470]

    2

    GFP

    Filter Set 38

    Zeiss

    000000-1031-346

    470/40
    [450-490]

    495LP

    525/50

    [500-550]

    FT 495

    BP 525/50

    3

    YFP

    Filter Set 46

    Zeiss

    000000-1196-681

    500/20

    [490-510]

    515LP

    535/30

    [520-550]

    4

    DsRed

    Filter Set 43

    Zeiss

    000000-1114-101

    545/25

    [533-557]

    570LP

    605/70

    [570-640]

    FT 570

    BP 605/70

    5

    TxRed

    Filter Set 45

    Zeiss

    000000-1114-462

    560/40

    [540-580]

    585LP

    630/75

    [593-667]

    6

    Cy3.0

    Chroma

    SP102v1

    546/11
    [541-551]

    557LP

    567/15

    [560-574]

    7

    Cy3.5

    Chroma

    SP103v1

    581/10
    [576-586]

    593LP

    617/40

    [597-637]

    8

    Cy5 narrow

    Chroma

    49009

    640/30
    [625-655]

    660LP

    690/50

    [665-715]

    9

    Analyseur DIC

    Zeiss

    10

    Vide

    1. 6

      Empty









       



      BF: Bright-field
      DIC: Interference contrast





    • Filter cubes
    1. Empty
    2. BS_455
    3. LSM TFT80/20 1447-381
    4. BF RL TIRF Calibration 424928
    5. Set 76 C/G/Dr
    6. Set 77 G/R/A6
    7. Développer
      titleComplete filter specifications


      Position

      Nom

      Marque

      Identifiant

      Filtre d'excitation 

      Miroir dichroïque

      Filtre d'émission

      Commentaire

      1

      Empty







      2

      BS_455

      Zeiss



      455LP


      To be used with FRAP 405

      3

      LSM Duo T20/R80 UV

      Zeiss






      4

      Brightfield Ref Light

      Zeiss






      5

      Set 76 CFP GFP DsRed

      Zeiss

      489076-0000-000

      390-422
      484-501
      549-573

      427
      503
      578

      448-472
      512-538
      585-631


      6

      Set 77 GFP/RFP/Alexa633

      Zeiss

      489077-0000-000

      469-497
      552-577
      629-650

      506
      582
      659

      510-542
      587-614
      665-711



    Tabs Page
    idUser Guide
    titleUser Guide


    UI Expand
    expandedtrue
    titleStartup
    1. Turn on the computer (#1)
    2. If required, turn on the incubation power bar
    3. Turn on the camera and laser power bar on the left of the microscope (#2)

    4. Turn on the microscope power bar on the right of the microscope (#3)

    5. Use your UdeM credentials to log in to Windows

      Remarque

      When using for the first time, it is necessary to import the microscope-specific parameters BEFORE starting the software. See the First Use section below.

    6. Start the Zen Blue software


    UI Expand
    titleFirst Use

    When using for the first time, it is necessary to import the microscope-specific parameters into the software. This procedure is usually carried out during the training session.However, it is also possible to use it to reset the software if it is not displayed correctly, for example.

    Remarque

    Please note, this procedure will delete all your experiment protocols and restore the software to its original settings.

    1. If open, close the Zen Blue software and wait for it to close completely (up to 30 seconds)
    2. On the Desktop open the Documentation folder
    3. Double-click Settings for Axio-Observer Z1
    4. A script will run and a black window will appear briefly
    5. You can then reopen the Zen Blue software


    UI Expand
    titleLoading samples

    This procedure puts the microscope in a safe configuration and performs a focus calibration. At the end of this procedure the microscope will be ready for acquisition.

    UI Expand
    titleFocus Calibration Z

    On the microscope touch screen:

    1. Press Home>Load Position to lower the stage to its lowest position
    2. Press Set Work Position to store this position
    3. If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
    4. Press Home>Microscope>Turret>Objectives>10x to select the 10x objective
    5. If asked, tap Done to remove the oil lens cleaning warning
    6. Press Home>Microscope>XYZ>Position>Z-Position>Set zero>Auto to perform focus calibration
    7. Press OK to start the focus calibration procedure
    8. Wait a few seconds for the calibration to be completed
    Remarque

    Once calibrated, the focus can be found at Z = 5 mm). The Z value can be found on the microscope touch screen Home>Z-Position


    UI Expand
    titleFirst focus
    Avertissement

    Make sure to calibrate the focus before performing the first focus.

    On the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press 10x to select the 10x lens
      Info

      The 10x objective is the safest because it has the longest working distance (5.3 mm). The sample will appear perfectly sharp long before the lens approaches it. It is recommended to always first focus with the safest lens. The objectives are para-focal, focusing with the safest objective will then allow you to easily find your sample with another objective.

    3. Press Home>Load Position to lower the stage to its lowest position
    4. Press Set Work Position to store this position
    5. If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
    6. Place the test slide on the microscope stage with the coverslip toward the objective
      Remarque

      Always use the test slide to perform the first focus.

    7. If necessary, move the stage so that the sample is centered on the objective

    On the computer:

    1. Open the Zen Blue software
    2. In the Locate tab, select BF or the desired fluorescence ((CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
    3. Adjust the focus with the main dial while looking through the eyepieces until the image is perfectly sharp

      Remarque

      Once calibrated, the focus can be found at Z = 5 mm). The Z value can be found on the microscope touch screen Home>Z-Position


    4. In the Locate tab, select Off to turn off the illumination


    UI Expand
    titleSeconday focus
    Avertissement
    titleImportant

    First focus with the safest lens before selecting another lens and continuing with secondary focus.


    UI Expand
    titleFocusing with air objectives

    This microscope does not have additional air objectives. However, if there were, the procedure would be as follows:

    After performing the first focus, on the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press on the desired lens

    In Zen Blue software:

    1. In the Locate tab, select BF or the desired fluorescence (CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
    2. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    3. In the Locate tab, select Off to turn the illumination off
    4. Your sample is ready for acquisition!


    UI Expand
    titleFocusing with oil lenses

    After performing the first focus, on

    Tabs Page
    idUser Guide
    titleUser Guide
    UI Expand
    expandedtrue
    titleStartup
    1. Turn on the computer (#1)
    2. If required, turn on the incubation power bar
    3. Turn on the camera and laser power bar on the left of the microscope (#2)

    4. Turn on the microscope power bar on the right of the microscope (#3)

    5. Use your UdM credentials to log in to Windows

      Remarque

      When using for the first time, it is necessary to import the microscope-specific parameters BEFORE starting the software. See the First Use section below.

    6. Start the Zen Blue software

    When using for the first time, it is necessary to import the microscope-specific parameters into the software. This procedure is usually carried out during the training session.However, it is also possible to use it to reset the software if it is not displayed correctly, for example.
    UI Expand
    titleFirst Use
    Remarque

    Please note, this procedure will delete all your experiment protocols and restore the software to its original settings.

    1. If open, close the Zen Blue software and wait for it to close completely (up to 30 seconds)
    2. On the Desktop open the Documentation folder
    3. Double-click Settings for Axio-Observer Z1
    4. A script will run and a black window will appear briefly
    5. You can then reopen the Zen Blue software
    UI Expand
    titleLoading samples

    This procedure puts the microscope in a safe configuration and performs a focus calibration. At the end of this procedure the microscope will be ready for acquisition.

    UI Expand
    titleFocus Calibration Z

    On the microscope touch screen:

    1. Press Home>Load Position to lower the stage to its lowest position
    2. Press Set Work Position to store this position
    3. If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
    4. Press Home>Microscope>Turret>Objectives>10x to select the 10x objective
    5. If asked, tap Done to remove the oil lens cleaning warning
    6. Press Home>Microscope>XYZ>Position>Z-Position>Set zero>Auto to perform focus calibration
    7. Press OK to start the focus calibration procedure
    8. Wait a few seconds for the calibration to be completed
    Remarque

    Once calibrated, the focus can be found at Z = 5 mm). The Z value can be found on the microscope touch screen Home>Z-Position

    UI Expand
    titleFirst focus
    Avertissement

    Make sure to calibrate the focus before performing the first focus.

    On

    the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press

    10x
    1. 63x Oil (1.4)or 100x Oil (1.4) to select the

    10x lens
    1. desired lens. The microscope will automatically lower the stage so that the sample is accessible.

      Info

      The

    10x objective is the safest
    1. 63x objective is the best oil objective because it has the

    longest working distance (5.3 mm). The sample will appear perfectly sharp long before the lens approaches it. It is recommended to always first focus with the safest lens. The objectives are para-focal, focusing with the safest objective will then allow you to easily find your sample with another objective.
  • Press Home>Load Position to lower the stage to its lowest position
  • Press Set Work Position to store this position
  • If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
  • Place the test slide on the microscope stage with the coverslip toward the objective
    Remarque

    Always use the test slide to perform the first focus.

  • If necessary, move the stage so that the sample is centered on the objective
  • On the computer:

    1. most optical corrections (Plan Apochromat) and the largest numerical aperture (1.4). It offers a lateral resolution of 240nm at a wavelength of 550nm.


    2. Remove your sample from the microscope
    3. Place a drop of oil on the objective
    4. Replace your sample from the microscope
    5. Press Done. The microscope will automatically return the sample to its original position

    In Zen Blue software:

    1. In the Locate tab, select BF or the desired fluorescence (CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
    2. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    3. In the Locate tab, select Off to turn the illumination off
    4. Your sample is ready for acquisition!
    UI Expand
    titleStorage management
    • Files can be saved temporarily (during acquisition) on the local C: drive (desktop)
    • At the end of each session, copy your data to your external drive and delete it from the local C: drive
    • You can store your files on the D: drive (Data Storage). If you do, please create a folder per laboratory using the principal investigator last name. Within, create one folder per user (Firstname_Lastname).
    Remarque

    In any case, your files should be removed from the C: drive.

  • Open the Zen Blue software
  • In the Locate tab, select BF or the desired fluorescence ((CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
  • Adjust the focus with the main dial while looking through the eyepieces until the image is perfectly sharp
    Remarque

    Once calibrated, the focus can be found at Z = 5 mm). The Z value can be found on the microscope touch screen Home>Z-Position

    In the Locate tab, select Off to turn off the illumination

    UI Expand
    title
    Seconday focus
    Avertissement
    titleImportant

    First focus with the safest lens before selecting another lens and continuing with secondary focus.

    UI Expand
    titleFocusing with air objectives

    This microscope does not have additional air objectives. However, if there were, the procedure would be as follows:

    After performing the first focus, on the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press on the desired lens

    In Zen Blue software:

    1. In the Locate tab, select BF or the desired fluorescence (CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
    2. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    3. In the Locate tab, select Off to turn the illumination off
    4. Your sample is ready for acquisition!
    UI Expand
    titleFocusing with oil lenses

    After performing the first focus, on the microscope touch screen:

  • Press Home>Microscope>Turret>Objectives
  • Press 63x Oil (1.4)or 100x Oil (1.4) to select the desired lens. The microscope will automatically lower the stage so that the sample is accessible.
    Info

    The 63x objective is the best oil objective because it has the most optical corrections (Plan Apochromat) and the largest numerical aperture (1.4). It offers a lateral resolution of 240nm at a wavelength of 550nm.

  • Remove your sample from the microscope
  • Place a drop of oil on the objective
  • Replace your sample from the microscope
  • Press Done. The microscope will automatically return the sample to its original position
  • In Zen Blue software:

    1. In the Locate tab, select BF or the desired fluorescence (CFP/GFP/DsRed ou GFP/RFP/Cy5, etc…) to activate the configuration
    2. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    3. In the Locate tab, select Off to turn the illumination off
    4. Your sample is ready for acquisition!
    UI Expand
    titleStorage management
    • Files can be saved temporarily (during acquisition) on the local C: drive (desktop)
    • At the end of each session, copy your data to your external drive and delete it from the local C: drive
    • You can store your files on the D: drive (Data Storage). If you do, please create a folder per laboratory using the principal investigator last name. Within, create one folder per user (Firstname_Lastname).
    Remarque

    In any case, your files should be removed from the C: drive.

    UI Expand
    titleShutdown
    1. Save your data
    2. Close the software Zen Blue
    3. Transfer your data to the D: drive (Data Storage) or to your external drive and delete it from the local C: drive
    4. If used, turn of the incubation power bar
    5. If used, clean oil lenses with lens cleaner and paper
    6. Turn off the microscope power bar on the right of the microscope (#3)

    7. Turn off the camera and laser power bar on the left of the microscope (#2)
    8. Turn off the computer
    Remarque
    titleImportant Reminders
    • Take back your samples including ones in the microscope
    • Leave the microscope and the working area clean
    Tabs Page
    idLight Path
    titleLight Path
    The following diagrams allow you to follow the light path in transmitted light (bright field, DIC) and in reflected light (fluorescence).
    Tabs Page
    idManuals
    titleManuals
    Shutdown
    1. Save your data
    2. Close the software Zen Blue
    3. Transfer your data to the D: drive (Data Storage) or to your external drive and delete it from the local C: drive
    4. If used, turn of the incubation power bar
    5. If used, clean oil lenses with lens cleaner and paper
    6. Turn off the microscope power bar on the right of the microscope (#3)

    7. Turn off the camera and laser power bar on the left of the microscope (#2)
    8. Turn off the computer
    Remarque
    titleImportant Reminders
    • Take back your samples including ones in the microscope
    • Leave the microscope and the working area clean
    Tabs Page
    idLight Path
    titleLight Path

    The following diagrams allow you to follow the light path in transmitted light (bright field, DIC) and in reflected light (fluorescence).





    Tabs Page
    idManuals
    titleManuals



    auitabspageidTechnical Datasheet
    Tabs Page
    idLog
    titleLog


    UI Expand
    titleTo do
    Check Loss of 488nm laser power
    UI Expand
    title2024-04-26

    (FIXED) Problem with the FRAP module:

    At first could not modulate the laser intensity (yet could not find the spot on the field), rebooted and then the FRAP fiber does not carry any light (even 488)

    ==> Laser manipulation module was too far in x and y (noticeable as a tilt and a gap between both parts of the module).

    UI Expand
    expandedtrue
    title2024-03-04

    Corrected Trigger Module configuration for the BackCam

    • reassigned each camera with its own trigger module in MTB config 
    UI Expand
    title2024-02-29
    • DualCam calibration parameters set, using beads
    • Realigned Lasers:
      • Laser output measured in spinning disk mode at the sample with 10x objective, 1x Extended tubelens, 100% laser power and ALL lasers ON:
        • 405nm: 0.70 mW before => 0.66 mW after
          • with laser 488 OFF: 0.81 mW before => 0.83 mW after
        • 488nm: 3.75 mW before => 4.17 mW after  
          • with laser 405 OFF: 3.95 mW before => 4.33 mW after
        • 561nm: 2.1 mW before => 2.37 mW after 
        • 639nm: 0.9 mW before => 1.1 mW after 
    • NOTE: AOTF2 for FRAP
    Remarque
    titleAOTF2 calibration

    For FRAP, the illumination is strongest with the AOTF2 at 60% and not 100%

    • Error message when switching between FRAP & SD illumination

    Avertissement
    titleAOTF2 Error message

    FRAP/SD illumination switching triggers an error message " 'MTBAOTF2LaserLine6' is not supported by the current hardware"

    Tabs Page
    idLog
    titleLog
    UI Expand
    titleTo do
    Check Loss of 488nm laser power

    UI Expand
    title2021-11-20
    • Zen 2.6 updated hotfix 12
    • Microsoft Windows update
    • Laser output measured in spinning disk mode at the sample with 10x objective, 1x Extended tubelens, 100% laser power and ALL lasers ON:
      • 405nm: 1.08 mW StdDev 0.01mW
      • 488nm: 3.3 mW  StdDev <0.01mW (3.7 mW if laser 405 is OFF)

        Avertissement
        title405nm and 488nm Interactions

        When both 405nm and 488nm laser are ON simultaneously, the output power is decreased by 11%.


      • 561nm: 2.6 mW StdDev <0.01mW
      • 639nm: 1.37 mW StDev 0.02 mW
    • Control for vibrations during construction work on the 4th floor


    UI Expand
    title2021-11-03
    • Error when the definite focus is used (unexpected error the definite focus did not respond)
    • To solve it:
      • Turn off the Zen Software
      • Turn off the microscope power bar (#3)
      • Turn off the definite focus by pressing and holding the definite focus button
      • Turn on the definite focus by pressing once the definite focus button
      • Wait until the definite focus display shows "Detecting stand"
      • Turn on the microscope power bar (#3)
    • Confirm that the definite focus is showing in the microscope tactile display
    • Open Zen software and run an experiment using the definite focus to confirm it is fully functional


    UI Expand
    title2021-09-27
    • Added to wiki
    UI Expand
    expanded
    true
    title
    Technical Datasheet
    2020-07-07
    • AOTF1 changed
    Tabs Page
    idTechnical Datasheet
    titleTechnical Datasheet

    Stand

    • Zeiss AxioObserver Z1 upright System ID: 1023798490; Serial number: 3834004569
    • Left imaging port

    Stand

    • Zeiss AxioObserver Z1 upright Serial:
      Part Number: 
      System ID
    • Camera adapter Model 60N-C, 1", 1x, Model: 426114

    • Motorized Neutral density filters for transmitted light

    • Manual Field diaphragm for transmitted light

    • Manual polarizer
    • Left imaging port with manual splitter
    • camera adapter Model 60N-C,

    • 1
    • 2/3", 1x,

    • Model: 426114
    • Trinocular with 100% ocular 40% occular/70% camera and 100% manual splitter
    • 3mm liquid light guide #805-0038
    • Zeiss 423302-0000 Collimator
    • Motorized Aperture diaphragm
    • Motorized Fluorescence field diaphragm

    Light sources

    • Transmitted Halogen light 12V 100W HAL 100 #423000
      • TBD Filters
    • Lumencor SOLA Serial 

    Condenser

    • Model: 426118-9000 for Yokogawa spinning disk

    • Yokogawa Spining disk CSU-X1 Serial 175116

    • Manual Field diaphragm for transmitted light

    • Right imaging port camera adapter witth slider 423685-9000 Axicam MRm r3.1 426509-9901-000 Serial 1-44-11-5127

    Light sources

    • LED lamp for transmitted light 423053-9080
    • Lumencor SOLA V-nIR Serial 27536 

    Condenser

    • Motorized condenser NA 0.55 WD 26mm 
    • Motorized condenser #424201-9902
    • Lens NA 0.9 WD TBD Part Number: TBD

    • Manual polarizer
    • Filter turret 6 positions manual

      H
    1. Empty
  • D Darkfield
  • DIC III #426706
  • Ph3
  • DICII #426702
  • Ph 2

  • DIC 426701
    1. Empty
    2. Empty
    3. Empty
    4. Empty
    5. Empty
    Ph 1

    Objectives

    1. 10x/0.30 Air WD 5.30 DIC I  Plan-NeoFluar M27 420340-9901-000

    2. 63x/1.40 46 Oil WD 0.19 DIC III Plan-Apochromat M27 420782-9900-00019

    3. 100x/1.40 46 Oil WD 0.17 DIC III Plan-Apochromat M27 420792-9900-000 

    Stage

    • Motorized stage Zeiss AIM System #2502000124
    • Remote control joystick
    • Inserts
      • Slide only
      • Plate

    Filters

    1. 17 

    Stage

    • Motorized stage ASI MIV-2000
    • Remote control joystick ASI MS-2000 #1111-2112-3426-2020 Model WK-XYB-AV200-PZ
    • Remote touch screen 432907-9901
    • Inserts
      • Combo Slide and petri ASI I-3091
      • Plate ASI I-3020

    Filters

    610-positions motorized filter wheel #

    DAPI Zeiss Filter Set 49 cube 424933

    Detector

    • 2 camera Evolve 512 Serial A10G104008 A16F104001
    • Definite Focus 1

    Workstation

    • HP
    • Z800
    • Z840 Workstation Serial:
    • CZC1473Y0Q Part number: WJ112ECJ#AK6
    • CZC7498KCQ
    • 2 x Intel Xeon
    • X5650 2.66
    •  E5-2623 v3 3.0 GHz
    • RAM
    • 24 GB DDR3 1333
    • 64 GB DDR4 1200 MHz ECC (
    • 12
    • 4 x
    • 2
    • 16 GB)
    • OS
    • 500 GB
    • 1 TB SSD
    • 410
    • 550 MB/s
    • 2
    • 4 TB HD Data Storage (2 x
    • 1
    • 2 TB spanned volume) 110 MB/s
    • Video Card
    • ATI FirePro V5800 1
    • NVIDIA Quadro K2200 4 GB DDR5
    • Monitor Dell ST2410 
    • Monitor HP ZR24W  24' 1920 x
    • 1080
    • 1200
    • Software Zen Blue 2.6 Hotfix 12

    Incubation

    • Zeiss Incubation Pecon XL Multi S1 Dark LS Serial 0509311 Zeiss #411857-9540-000

    Consumables


    Tabs Page
    idFAQ
    titleTroubleshooting & FAQ

    Troubleshooting

    UI Expand
    titleI don't see my sample

    The spinning disk is a multipoint confocal. Outside the focal plane the sample disappears completely. It is therefore easier to find your sample through the eyepieces. Follow the tuning procedure to achieve this.

    UI Expand
    titleI don't see any fluorescence!

    The best way to solve a problem in Microscopy is to follow the light path. You will find in the Light path tab of this page, the diagrams which will allow you to follow the light all along its path through the microscope.

    1. Open the light path file
    2. Starting from the light source and moving towards the detector, verify that there is indeed light after each component of the microscope

    FAQ

    UI Expand
    titleCan I use this microscope to look at cell in a dish?

    Yes. It is an inverted microscope designed for the observation of living specimens. The spinning disk is particularly appreciated for its limited phototoxicity. This is an inverted microscope designed to look at specimen in a dish or a multi-well plate. The objectives are optimized to image through thin glass bottom multi-well plates. You may also image specimen mounted between a slide and a 0.17mm thick coverslip.



    Tabs Container
    idDemo Image
    titleZeiss Axio-Observer Z1 Spinning disk
    directionhorizontal


    Tabs Page
    idDemo Image
    titleDemo Image





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