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titleFrançais
typeprimary
urlhttps://wiki.umontreal.ca/display/Microscopie/Zeiss+Axio-Imager+Z2


Tabs Container
idInstrument Tabs
titleZeiss Axio-Imager Z2
directionhorizontal
Cy3.0
Cy3.5

Detector


Tabs Page
idDescription
titleDescription

Zeiss Axio-Imager Z2 upright microscope

J-A Bombardier Building, Room 3223-01
Advanced Microscope Tier 1 usage price

Instrument awarded to Dr. Pascal Chartrand by the Canadian Foundation for Innovation (CFI)

  • Applications
    • Transmitted light
    • Interference Contrast (DIC)
    • Fluorescence
  • Light sources

    • 12V 100W halogen lamp for transmitted light

    • 200W Exact X-Cite Lamp (340~675nm) for Fluorescence

Full specifications of the exact
    • Développer
      titleCaractéristiques complètes de la lampe X-Cite
lamp
    • exacte
Peak emission
    • Emission peak (nm)

      Power (mW)

      334

      5

      365

      20

      405

      19

      436

      22

      546

      21

      579

      18

Exact Quick Start Guide (English pdf) Exact User Guide (English pdf)
Comparison between HBO vs X-Cite Exact Mercury Lamp Emission Spectra (English) ( Source )
  • Objectives

    • Objectives

    1. 10x/0

    10x/0
    1. .30 Air WD 5.30

    2. 20x/0.80 Air WD 0.61

    3. 40x/0.75 Air WD 0.71
    4. 63x/1.40

    WD
    1. Oil

    0
    1. WD 0.19

    2. 100x/1.
    30 
    1. 30 Oil WD 0.20
    oil
    1. 100x/1.40 Oil WD 0.17

    oil

  • Full lens specifications
  • BF: Bright-field
    DIC: Interference contrast

    Filter cubes

    1. DAPI
    2. GFP
    3. YFP
    4. DsRed/Cy3
    5. TxRed
    6. Cy3.0
    7. Cy3.5
    8. Cy5
    9. DIC analyzer
    10. Empty

    Complete filter specifications

    PositionNameBrandIdentifierExcitation filter Dichroic mirrorEmission filterComment1DAPI
    Filter Set 49
    Zeiss

    488049-9901-000

    365/50
    [ 340-390]
    395LP445/50
    [420 -470]
    2GFP
    Filter Set 38
    Zeiss000000-1031-346

    470/40
    [450 -490]

    495LP

    525/50
    [500 -550]
    FT 495BP 525/503YFP
    Filter Set 46
    Zeiss

    000000-1196-681

    500/20
    [490 -510]
    515LP535/30
    [520 -550]
    4DsRed
    Filter Set 43
    Zeiss

    000000-1114-101

    545/25
    [533 -557]
    570LP605/70
    [570 -640]
    FT570BP 605/705TxRed
    Filter Set 45
    Zeiss000000-1114-462560/40
    [540 -580]
    585LP630/75
    [593 -667]
    6Chroma

    SP102v1

    546/11
    [541 -551]

    557LP567/15
    [560 -574]
    7ChromaSP103v1

    581/10
    [576 -586]

    593LP617/40
    [597 -637]
    8Cy5 narrowChroma49009

    640/30
    [625 -655]

    660LP690/50
    [665 -715]
    9DIC analyzerZeiss10Empty
    Développer
    titleCaractéristiques complètes des objectifs

    Position

    Nom

    Marque

    Nom complet

    Identifiant

    Grossissement

    Ouverture numérique

    Immersion

    Type

    Distance de travail (mm)

    Transmittance

    (% [nm])

    Technique

    Épaisseur du couvre-objet (mm)

    1

    10x/0.30
    Air

    Zeiss

    10x/0.3 DIC I

    EC Plan-Neo Fluar

    M27

    420340-9901-000

    10x

    0.3

    Air

    Plan Neofluar

    5.2

    >90% [480-780]

    BF, DIC, Fluo

    0.17

    2

    20x/0.80
    Air

    Zeiss

    20x/0.8 DIC II

    Plan-Apochromat
    W0.8x1/36"

    440640-9903-000

    20x

    0.8

    Air

    Plan Apochromat

    0.55

    >90% [410-800]

    BF, DIC, Fluo

    0.17

    3


    40x/0.75
    Air


    Zeiss

    40x/0.75 DIC II
    EC Plan-Neofluar
    M27

    420360-9900-000

    40x

    0.75


    Air


    Plan Neofluar

    0.71

    >90% [410-780]

    BF, DIC, Fluo

    0.17

    4

    63x/1.40

    Huile

    Zeiss

    63x/1.4 DIC III

    Plan-Apochromat

    M27

    420782-9900-000

    63x

    1.4



    Remarque
    Huile



    Plan Apochromat

    0.19

    >80% [440-710]

    BF, DIC, Fluo

    0.17

    5

    100x/1.30
    Huile

    Zeiss

    100x/1.3 DIC III
    EC Plan-Neofluar
    M27

    420490-9900-000

    100x

    1.3



    Remarque
    Huile



    Plan Neofluar

    0.20

    >80% [400-820]

    BF, DIC, Fluo

    0.17

    6

    100x/1.40
    Huile

    Zeiss

    100x/1.4 DIC III
    Plan-Apochromat
    M27

    420792-9900-000

    100x

    1.4



    Remarque
    Huile



    Plan Apochromat

    0.17

    >80% [400-820]

    BF, DIC, Fluo

    0.17

    BF: Bright-field
    DIC: Interference contrast

    • Filter cubes
    1. DAPI
    2. GFP
    3. YFP
    4. DsRed/Cy3
    5. TxRed
    6. Cy3.0
    7. Cy3.5
    8. Cy5
    9. DIC analyzer
    10. Empty
      Développer
      titleComplete filter specifications


      Position

      Nom

      Marque

      Identifiant

      Filtre d'excitation 

      Miroir dichroïque

      Filtre d'émission

      Commentaire



      1

      DAPI

      Filter Set 49

      Zeiss

      488049-9901-000

      365/50

      [340-390]

      395LP

      445/50

      [420-470]




      2

      GFP

      Filter Set 38

      Zeiss

      000000-1031-346

      470/40
      [450-490]

      495LP

      525/50

      [500-550]


      FT 495

      BP 525/50

      3

      YFP

      Filter Set 46

      Zeiss

      000000-1196-681

      500/20

      [490-510]

      515LP

      535/30

      [520-550]




      4

      DsRed

      Filter Set 43

      Zeiss

      000000-1114-101

      545/25

      [533-557]

      570LP

      605/70

      [570-640]

      FT 570

      BP 605/70


      5

      TxRed

      Filter Set 45

      Zeiss

      000000-1114-462

      560/40

      [540-580]

      585LP

      630/75

      [593-667]




      6

      Cy3.0

      Chroma

      SP102v1

      546/11
      [541-551]

      557LP

      567/15

      [560-574]




      7

      Cy3.5

      Chroma

      SP103v1

      581/10
      [576-586]

      593LP

      617/40

      [597-637]




      8

      Cy5 narrow

      Chroma

      49009

      640/30
      [625-655]

      660LP

      690/50

      [665-715]




      9

      Analyseur DIC

      Zeiss








      10

      Vide










    When using for the first time, it is necessary to import the microscope-specific parameters into the software. This procedure is usually carried out during the training session.However, it is also possible to use it to reset the software if it is not displayed correctly, for example.
    Tabs Page
    idUser Guide
    titleUser Guide


    UI Expand
    expandedtrue
    titleStartup
    1. Remove the dust cover from the microscope
    2. Turn on the computer (#1)
    3. Turn on the X-Cite exacte lamp on the shelf to the left of the microscope (#2)

      Info

      The X-Cite exact lamp display will flash during heating (approximately 4 minutes) and will then be operational.

      Avertissement

      The exact X-Cite lamp must be turned on for at least 30 minutes before being turned off and vice versa

    4. Turn on the power bar on the shelf above the computer (#3)

    5. Press the microscope start button located on the rear left of the microscope (#4)

    6. Use your UdM credentials to log in to Windows

      Remarque

      When using for the first time, it is necessary to import the microscope-specific parameters BEFORE starting the software. See the First Use section below.


    7. Start the Zen Blue software


    UI Expand
    titleFirst Use

    When using for the first time, it is necessary to import the microscope-specific parameters into the software. This procedure is usually carried out during the training session.However, it is also possible to use it to reset the software if it is not displayed correctly, for example.

    Remarque

    Please note, this procedure will delete all your experiment protocols and restore the software to its original settings.

    1. If open, close the Zen Blue software and wait for it to close completely (up to 30 seconds)
    2. On the Desktop open the Documentation folder
    3. Double-click Settings for Axio-Imager Z2
    4. A script will run and a black window will appear briefly
    5. You can then reopen the Zen Blue software


    UI Expand
    titleLoading samples

    This procedure puts the microscope in a safe configuration and performs a focus calibration. At the end of this procedure the microscope will be ready for acquisition.

    UI Expand
    titleFocus Calibration Z

    On the microscope touch screen:

    1. Press Home>Load Position to lower the stage to its lowest position
    2. Press Set Work Position to store this position
    3. If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
    4. Press Home>Microscope>Turret>Objectives>10x to select the 10x objective
    5. If asked, tap Done to remove the oil lens cleaning warning
    6. Press Home>Microscope>XYZ>Position>Z-Position>Set zero>Auto to perform focus calibration
    7. Press OK to start the focus calibration procedure
    8. Wait a few seconds for the calibration to be completed
    Remarque

    Once calibrated, the focus can be found at Z = 11 mm). The Z value can be found on the microscope touch screen Home>Z-Position


    UI Expand
    titleFirst focus
    Avertissement
    titleImportant

    Make sure to calibrate the focus before performing the first focus.

    On the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press 10x to select the 10x lens
      Info

      The 10x objective is the safest because it has the longest working distance (5.3 mm). The sample will appear perfectly sharp long before the lens approaches it. It is recommended to always first focus with the safest lens. The objectives are para-focal, focusing with the safest objective will then allow you to easily find your sample with another objective.

    3. Press Home>Load Position to lower the stage to its lowest position
    4. Press Set Work Position to store this position
    5. If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
    6. Place the test slide on the microscope stage with the coverslip toward the objective
      Remarque
      titleImportant

      Always use the test slide to perform the first focus.

    7. If necessary, move the stage so that the sample is centered on the objective

    On the computer:

    1. Open the Zen Blue software
    2. In the Locate tab, select BF or the desired fluorescence (GFP, DsRed, DAPI, etc…) to activate the configuration
    3. Adjust the focus with the main dial while looking through the eyepieces until the image is perfectly sharp

      Remarque

      Once calibrated, the focus can be found at Z = 11 mm). The Z value can be found on the microscope touch screen Home>Z-Position


    4. In the Locate tab, select Off to turn off the illumination


    UI Expand
    titleSeconday focus
    Avertissement
    titleImportant

    First focus with the safest lens before selecting another lens and continuing with secondary focus.


    UI Expand
    titleFocusing with air objectives

    After performing the first focus, on the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press 20x or 40x to select the desired lens

      Info

      The 20x objective is the best Air objective because it has the greatest number of optical corrections (Plan Apochromat) and the largest numerical aperture (0.8). It offers a lateral resolution of 420nm at a wavelength of 550nm.


    3. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    4. Your sample is ready for acquisition!


    UI Expand
    titleFocusing with oil lenses

    After performing the first focus, on the microscope touch screen:

    1. Press Home>Microscope>Turret>Objectives
    2. Press 63x Oil, 100x Oil (1.3) ou 100x Oil (1.4) to select the desired lens. The microscope will automatically lower the stage so that the sample is accessible.

      Info

      The 63x objective is the best oil objective because it has the most optical corrections (Plan Apochromat) and the largest numerical aperture (1.4). It offers a lateral resolution of 240nm at a wavelength of 550nm.


    3. Place a drop of oil on your sample
    4. Press Done. The microscope will automatically return the sample to its original position

    In Zen Blue software:

    1. In the Locate tab, select BF or the desired fluorescence (GFP, DsRed, DAPI, etc…) to activate the configuration
    2. Adjust the focus with the precision dial while looking through the eyepieces until the image is perfectly sharp
    3. In the Locate tab, select Off to turn the illumination off
    4. Your sample is ready for acquisition!
    UI Expand
    titleStorage management
    • Files can be saved temporarily (during acquisition) on the local C: drive (desktop)
    • At the end of each session, copy your data to your external drive and delete it from the local C: drive
    • You can store your files on the D: drive (Data Storage). If you do, please create a folder per laboratory using the principal investigator last name. Within, create one folder per user (Firstname_Lastname).
    Remarque

    In any case, your files should be removed from the C: drive.

    UI Expand
    titleShutdown
    1. Save your data
    2. Close the software Zen Blue
    3. Transfer your data to the D: drive (Data Storage) or to your external drive and delete it from the local C: drive
    4. If used, clean oil lenses with lens cleaner and paper
    5. Turn off the power bar on the shelf above the computer (#3)

    6. Turn off the X-Cite exacte lamp (#2)

      Avertissement

      The X-Cite lamp must be on for at least 30 min before being turned off and vice-versa

    7. Turn off the computer
    8. Cover the microscope
    Remarque
    titleImportant Reminders
    • Take back your samples including ones in the microscope
    • Leave the microscope and the working area clean
    Tabs Page
    idUser Guide
    titleUser Guide
  • Remove the dust cover from the microscope
  • Turn on the computer (#1)
  • Turn on the exact X-Cite lamp on the shelf to the left of the microscope (#2)

    UI Expand
    expandedtrue
    titleStartup
    Info

    The X-Cite exact lamp display will flash during heating (approximately 4 minutes) and will then be operational.

    Avertissement

    The exact X-Cite lamp must be turned on for at least 30 minutes before being turned off and vice versa

  • Turn on the power bar on the shelf above the computer (#3)

  • Press the microscope start button located on the rear left of the microscope (#4)

  • Use your UdM credentials to log in to Windows

    Remarque

    Attention, cette procédure supprimera tous vos protocoles d’expérience et rétablira les paramètres originaux du logiciel.

  • Start the Zen Blue software

  • UI Expand
    titleFirst Use
    Remarque

    Please note, this procedure will delete all your experiment protocols and restore the software to its original settings.

  • If open, close the Zen Blue software and wait for it to close completely (up to 30 seconds)
  • On the Desktop open the Documentation folderDouble-click Settings for Axio-Imager Z2
  • A script will run and a black window will appear briefly
  • You can then reopen the Zen Blue software
  • UI Expand
    titleLoading samples

    This procedure puts the microscope in a safe configuration and performs a focus calibration. At the end of this procedure the microscope will be ready for acquisition.

    UI Expand
    titleFocus Calibration

    On the microscope touch screen:

  • Press Home>Load Position to lower the stage to its lowest position
  • Press Set Work Position to store this position
  • If necessary, move the focus slightly up to remove the “Lower Z limit reached” message displayed on the touchscreen
  • Press Home>Microscope>Turret>Objectives>10x to select the 10x objective
  • If asked, tap Done to remove the oil lens cleaning warning
  • Press Home>Microscope>XYZ>Position>Z-Position>Set zero>Auto to perform focus calibrationPress OK to start the focus calibration procedureWait a few seconds for the calibration to be completed
    Remarque

    Si calibrée, la mise au point est aux alentours de Z = 11 mm). La valeur de la position en Z est visible sur l'écran tactile Home>Z-Position

    UI Expand
    titlePremière mise au point
    Avertissement
    titleImportant

    Faire d’abord la calibration de la mise au point avant d'effectuer la première mise au point.

    Sur l’écran tactile du microscope :

  • Appuyez sur Home>Microscope>Turret>Objectives
  • Appuyez sur 10x pour sélectionner l'objectif 10x

    Info

    L’objectif 10x est le plus sécuritaire car il possède la plus grande distance de travail (5.3 mm). L'échantillon apparaitra parfaitement net bien avant que l'objectif ne s'approche de celui-ci. Il est recommandé de toujours faire la première mise au point avec l'objectif le plus sécuritaire. Les objectifs sont para-focaux, faire la mise au point avec l'objectif le plus sécuritaire vous permettra ensuite de trouver facilement votre échantillon avec un autre objectif.

  • Appuyez sur Home>Load Position pour faire descendre la platine dans sa position la plus basse
  • Appuyez sur Set Work Position pour mémoriser cette position
  • Si nécessaire, déplacez la mise au point légèrement vers le haut pour supprimer le message « Lower Z limit reached» qui s'affiche sur l'écran tactile
  • Placez la lame de test sur la platine du microscope avec le couvre-objet vers l'objectif

    Remarque
    titleImportant

    Toujours utiliser la lame de test pour effectuer la première mise au point.

     

  • Si nécessaire, déplacez la platine pour que l'échantillon soit centré sur l'objectif
  • Sur l’ordinateur :

  • Ouvrez le logiciel Zen Blue

  • Dans l’onglet Locate, sélectionnez BF ou la fluorescence désirée (GFP, DsRed, DAPI, etc…) pour activer la configuration

  • Ajustez la mise au point avec la molette principale tout en regardant dans les oculaires jusqu'à ce que l'image soit parfaitement nette

    Remarque

    Si calibrée, la mise au point est aux alentours de Z = 11 mm). La valeur de la position en Z est visible sur l'écran tactile Home>Z-Position

  • Dans l’onglet Locate, sélectionnez Off pour éteindre l'illumination
  • UI Expand
    titleMise au point secondaire
    Avertissement
    titleImportant

    Faire d’abord la première mise au point avec l'objectif le plus sécuritaire avant de sélectionner un autre objectif et de poursuivre avec la mise au point secondaire.

    UI Expand
    titleMise au point avec les objectifs à air

    Après avoir effectué la première mise au point, sur l’écran tactile du microscope :

  • Appuyez sur Home>Microscope>Turret>Objectives

  • Appuyez sur 20x ou 40x pour sélectionner l'objectif désiré

    Info

    L’objectif 20x est le meilleur objectif à Air car il possède le plus grand nombre de corrections optiques (Plan Apochromat) et la plus grande ouverture numérique (0.8). Il offre une résolution latérale de 420nm à une longueur d'onde de 550nm.

  • Ajustez la mise au point avec la molette de précision tout en regardant dans les oculaires jusqu'à ce que l'image soit parfaitement nette
  • Votre échantillon est prêt pour l’acquisition !

    UI Expand
    titleMise au point avec les objectifs à l'huile

    Après avoir effectué la première mise au point, sur l’écran tactile du microscope :

  • Appuyez sur Home>Microscope>Turret>Objectives

  • Appuyez sur 63x Oil, 100x Oil (1.4) ou 100x Oil (1.4) pour sélectionner l'objectif désiré. Le microscope abaissera automatiquement la platine pour que l'échantillon soit accessible.

    Info

    L'objectif 63x est le meilleur objectif à l'huile car il possède le plus grand nombre de corrections optiques (Plan Apochromat) et la plus grande ouverture numérique (1.4). Il offre une résolution latérale de 240nm à une longueur d'onde de 550nm.

  • Déposer une goutte d’huile sur votre échantillon
  • Appuyez sur Done. Le microscope replacera automatiquement l'échantillon à sa position originale.
  • Dans le logiciel Zen Blue :

    1. Dans l’onglet Locate, sélectionnez BF ou la fluorescence désirée (GFP, DsRed, DAPI, etc…) pour activer la configuration
    2. Ajustez la mise au point avec la molette de précision tout en regardant dans les oculaires jusqu'à ce que l'image soit parfaitement nette
    3. Dans l’onglet Locate, sélectionnez Off pour éteindre l'illumination

    Votre échantillon est prêt pour l’acquisition !

    UI Expand
    titleGestion du stockage
    • Les fichiers peuvent être sauvés temporairement (pendant l’acquisition) sur le disque local C: (bureau)
    • À la fin de chaque session, copiez vos données sur votre disque externe et supprimez-les du disque local C:
    • Vous pouvez stocker vos fichiers sur le disque D: (Data Storage). Si vous utilisez ce disque, veuillez créer un dossier par laboratoire en utilisant le nom de famille du chercheur principal. À l’intérieur, créez un dossier par utilisateur (Prénom_Nom).
    Remarque

    Dans tous les cas, ne stockez pas vos fichiers sur le disque C:

    UI Expand
    titleFermeture
  • Enregistrez vos données
  • Fermez le logiciel Zen Blue
  • Transférez vos données sur le disque D: (Data Storage) ou sur votre disque dur externe et les supprimer du disque local C:
  • Éteindre l'ordinateur
  • Éteindre la barre d'alimentation sur l'étagère au dessus de l'ordinateur (#3)
  • Éteindre la lampe X-Cite exacte (#2)

    Avertissement

    La lampe X-Cite exacte doit être allumée pendant au moins 30 minutes avant d’être éteinte et vice-versa

  • Couvrir l’instrument avec la housse de protection
  • Remarque
    titleRappels Importants
    • Récupérez vos échantillons notamment ceux dans le microscope
    • Laissez le microscope et l’espace de travail propre
    Tabs Page
    idLight Path
    titleLight Path

    The following diagrams allow you to follow the light path in transmitted light (bright field, DIC) and in reflected light (fluorescence).

    View file
    name

    Zeiss_Z2_Lightpath.pdf
    height250
    Tabs Page
    idManuals
    titleManuals

    Zeiss_Z2_Lightpath.pdf
    height250




    Tabs Page
    idManuals
    titleManuals


    Tabs Page
    idLog
    titleLog
    UI Expand
    titleTo do
    • Quality control for Illumination, Liquid light guide and filters quality.
    • Camera sensor clean up
    UI Expand
    title2024-06-05
    • Cy5 channel was misaligned with TXR & Cy3: switched Cy5 & TXR fllter cubes positions (7 ↔  8). Cy5 (blue signal) was shifted in y relative to TXR and AF555 channels (left), and appears to colocalize after cube slot switch (right):

    Image Added Image Added

    • Please advise platform managers if other channels appear misaligned.
    UI Expand
    title2024-02-14 Added to wiki
    • User guide added to Wiki French and english version
    Tabs Page
    idLog
    titleLog
    UI Expand
    titleTo do
    • Quality control for Illumination, Liquid light guide and filters quality.
    • Camera sensor clean up
    UI Expand
    title2022-03-28
    • Objective 10-0.3 Plan NeoFluor #420340-9901-000 added
    • Parafocality adjustment using 100x-1.4 as reference
    • Condenser removed and cleaned (broken glass)
    UI Expand
    title2021-10-20
    • Zen 2.6 updated hotfix 12
    • Microsoft Windows updated
    UI Expand
    title2021-10-18
    • X-Cite Liquid light guide replaced (Transmittance was 75% remaining)
    • Fluorescence Light bulb replaced (was 2593 hours)
    • Power output at the sample using 20x objective GFP cube 488nm is 116mW
    • Objective parafocality adjusted
    • Objective Focus speed was changed 10x: 7; 20x: 6; 4-x: 5; 63x: 3; 100x-1.3: 3; 100x-1.4: 3.
    • Condenser lens cleaned (oil)
    • Data storage OK
    UI Expand
    title2021-09-27
    • Added to wiki


    Tabs Page
    idTechnical Datasheet
    titleTechnical Datasheet

    Stand

    • Zeiss AxioImager Z2 upright Serial: 35230001000
      Part Number: 430000-9902
      System ID 1022265893
    • Camera adapter Model 60N-C, 1", 1x, Model: 426114

    • Motorized Neutral density filters for transmitted light

    • Manual Field diaphragm for transmitted light

    • Manual polarizer
    • Left imaging port with manual splitter camera adapter Model 60N-C, 1", 1x, Model: 426114
    • Trinocular with 100% ocular 40% occular/70% camera and 100% manual splitter
    • 3mm liquid light guide #805-0038
    • Zeiss 423302-0000 Collimator
    • Motorized Aperture diaphragm
    • Motorized Fluorescence field diaphragm

    Light sources

    • Transmitted Halogen light 12V 100W HAL 100 #423000
      • TBD Filters
    • X-Cite exacte 200 W Model XCT10A Serial: XCT10A-0156

    Condenser

    • Motorized condenser #424201-9902
    • Lens NA 0.9 WD TBD Part Number: TBD

    • Manual polarizer
    • Filter turret 6 positions manual

      1. H Empty

      2. D Darkfield
      3. DIC III #426706
      4. Ph3
      5. DICII #426702
      6. Ph 2

      7. DIC 426701
      8. Ph 1

    Objectives

    1. 10x/0.30 Air WD 5.30 DIC I  Plan-NeoFluar M27 420340-9901-000

    2. 20x/0.80 Air WD 0.61 DIC II Plan-Apochromat W0.8x1/36" 440640-9903-000

    3. 40x/0.75 Air WD 0.71 DIC II EC Plan-NeoFluar M27 420360-9900-000
    4. 63x/1.40 Oil WD 0.19 DIC III Plan-Apochromat M27 420782-9900-000

    5. 100x/1.30 Oil WD 0.20 DIC III Plan-NeoFluar M27 420490-9900-000
    6. 100x/1.40 Oil WD 0.17 DIC III Plan-Apochromat M27 420792-9900-000 

    Stage

    • Motorized stage Zeiss AIM System #2502000124
    • Remote control joystick
    • Inserts
      • Slide only

    Filters

    10-positions motorized filter wheel #424913 #424905-0160-810

    1. DAPI Zeiss Filter Set 49 cube 424933
    2. GFP Zeiss  Filter Set 38 cube 424933
    3. YFP Zeiss  Filter Set 46 cube 424933
    4. DsRed Zeiss  Filter Set 43 cube 424933
    5. TxRed Zeiss  Filter Set 45 cube 424933
    6. Cy3.0 Chroma #SP102v1 C162410
    7. Cy3.5 Chroma #SP103v1 C162411
    8. Cy5 Chroma #49009 C162412
    9. DIC Analyzer Zeiss 424932-01
    10. Empty

    Detector

    • Photometrics Prime Camera sCMOS 2048 x 2048 pixels, 16-bit, 30 images/s at full resolution, detector size 13.312mm x 13.312mm (18.8 mm diagonal). Serial: A18B202001. Cameralink cable and PCIe adapter available for imaging 100 images/s

    Workstation

    • HP Z800 Workstation Serial: CZC1473Y0Q Part number: WJ112ECJ#AK6
    • 2 x Intel Xeon X5650 2.66 GHz
    • RAM 24 GB DDR3 1333 MHz ECC (12 x 2 GB)
    • OS 500 GB SSD 410 MB/s
    • 2 TB HD Data Storage (2 x 1 TB spanned volume) 110 MB/s
    • Video Card ATI FirePro V5800 1 GB DDR5
    • Monitor Dell ST2410  24' 1920 x 1080
    • Software Zen Blue 2.6 Hotfix 12

    Incubation

    • None

    Consumables


    Tabs Page
    idFAQ
    titleTroubleshooting & FAQ

    Troubleshooting

    UI Expand
    titleI don't see any fluorescence!

    The best way to solve a problem in Microscopy is to follow the light path. You will find in the Light path tab of this page, the diagrams which will allow you to follow the light all along its path through the microscope.

    1. Open the light path file
    2. Starting from the light source and moving towards the detector, verify that there is indeed light after each component of the microscope

    FAQ

    UI Expand
    titleCan I use this microscope to observe cells in culture?
    No. It is an upright microscope designed for the observation of specimens between a slide and a coverslip (thickness 0.17mm).





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